STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degTPleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family. (381 aa)    
Predicted Functional Partners:
CLOAM0727
Oxidoreductase, Gfo/Idh/MocA family.
  
 0.924
CLOAM0101
Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase).
 
  
 0.818
CLOAM0102
Hypothetical protein; No homology to any previously reported sequences.
     
 0.792
etfB
Electron transfer flavoprotein beta subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier.
       0.741
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.741
wbbJ
Acetyltransferase (the isoleucine patch superfamily).
 
 0.722
CLOAM1630
UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.491
purB
Adenylosuccinate lyase (adenylosuccinase) (ASL) (glutamyl-tRNA synthetase regulatory factor); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.479
CLOAM0106
Hypothetical protein; No homology to any previously reported sequences.
       0.471
CLOAM0108
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.449
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.