Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
etfBElectron transfer flavoprotein beta subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier. (261 aa)    
Predicted Functional Partners:
CLOAM1482
Putative electron transfer flavoprotein alpha-subunit (etfA and 4Fe-4S ferredoxin modules); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 0.999
caiA
Acyl-CoA dehydrogenase.
 
 0.989
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.773
CLOAM0101
Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase).
  
    0.744
CLOAM0102
Hypothetical protein; No homology to any previously reported sequences.
       0.741
degT
Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
       0.741
hymB
[Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit beta; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.716
CLOAM0324
Pyruvate-ferredoxin/flavodoxin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.711
CLOAM1631
Dihydropyrimidine dehydrogenase (NADP+); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.677
CLOAM1684
Formate dehydrogenase major subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.651
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.