Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
CLOAM0128ABC transporter, permease protein. (261 aa)    
Predicted Functional Partners:
CLOAM0129
ABC transporter, ATP-binding protein.
 0.999
znuA
ABC-type Mn/Zn transport system, periplasmic Mn/Zn-binding (lipo)protein (surface adhesin A); Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
CLOAM1906
Hypothetical protein; No homology to any previously reported sequences; Belongs to the Fur family.
  
  
 0.525
lptB
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily.
     
 0.444
potA
Spermidine/putrescine import ATP-binding protein potA (ABC transporter); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
     
 0.432
ycjV
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Belongs to the ABC transporter superfamily.
    
 0.417
CLOAM0132
Hypothetical protein; No homology to any previously reported sequences.
     
 0.411
pepA
Cytosol aminopeptidase (leucine aminopeptidase) (LAP) (leucyl aminopeptidase) (aminopeptidase A/I); Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.406
CLOAM0127
Hypothetical protein; No homology to any previously reported sequences.
       0.404
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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