STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0138Putative aromatic amino acid aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (387 aa)    
Predicted Functional Partners:
aspC
Aminotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.949
CLOAM0919
Putative Histidinol-phosphatase; Homologs of previously reported genes of unknown function; Belongs to the PHP hydrolase family. HisK subfamily.
  
 
 0.925
CLOAM1245
Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
0.923
gmbH
D,D-heptose 1,7-bisphosphate phosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the gmhB family.
  
  
 0.706
lysC
Aspartokinase 2 (Aspartokinase II) (Aspartate kinase 2) [Contains: Aspartokinase II alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aspartokinase family.
 
  
 0.678
kat
3-aminobutyryl-CoA aminotransferase; 3-aminobutyryl-CoA aminotransferase that acts specifically on coenzyme A (CoA) esters and catalyzes the conversion of 3-aminobutyryl- CoA into acetoacetyl-CoA in an alternative pathway of lysine fermentation; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.648
CLOAM1147
Ornithine--oxo-acid transaminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.491
metG
Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
 0.480
CLOAM0139
Hypothetical protein; No homology to any previously reported sequences.
       0.475
CLOAM0140
Hypothetical protein; No homology to any previously reported sequences.
       0.475
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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