STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0164Putative Gingipain R; No homology to any previously reported sequences. (1206 aa)    
Predicted Functional Partners:
CLOAM0610
Hypothetical protein; No homology to any previously reported sequences.
  
 
 
 0.859
CLOAM0617
Hypothetical protein; No homology to any previously reported sequences.
  
 
   0.792
CLOAM1149
Hypothetical protein; No homology to any previously reported sequences.
  
 
   0.774
CLOAM0162
Hypothetical protein; No homology to any previously reported sequences; Belongs to the PlsY family.
       0.773
CLOAM0163
Predicted enzyme with a TIM-barrel fold; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.773
CLOAM0603
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.770
CLOAM0976
Hypothetical protein; No homology to any previously reported sequences.
  
     0.758
CLOAM0735
Hypothetical protein; No homology to any previously reported sequences.
  
     0.754
CLOAM0565
Hypothetical protein; No homology to any previously reported sequences.
  
     0.752
CLOAM0567
Hypothetical protein; No homology to any previously reported sequences.
  
     0.747
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.