STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcemethylmalonyl-CoA epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (133 aa)    
Predicted Functional Partners:
mutA
Methylmalonyl-CoA mutase small subunit (MCM-beta); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.962
mutB
Methylmalonyl-CoA mutase large subunit (MCM-alpha); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.961
argK
ATPase/kinase associated with arginine transport; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.925
CLOAM1715
Putative S-methylmalonyl-CoA carboxyltransferase (Transcarboxylase) 12S subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.785
CLOAM1768
Putative S-Methylmalonyl-CoA decarboxylase, alpha chain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.785
CLOAM1770
Putative S-Methylmalonyl-CoA decarboxylase, gamma chain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.679
CLOAM1717
Putative S-methylmalonyl-CoA carboxyltransferase (Transcarboxylase) 5S and 1.3S subunits; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.599
korB
2-oxoglutarate ferredoxin oxidoreductase, beta chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.495
korC
2-oxoglutarate ferredoxin oxidoreductase, gamma chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.443
CLOAM0298
2-oxoglutarate ferredoxin oxidoreductase subunit delta; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
       0.443
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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