Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CLOAM0310Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (85 aa)    
Predicted Functional Partners:
CLOAM0308
Hypothetical protein; No homology to any previously reported sequences.
       0.741
CLOAM0309
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.741
CLOAM0787
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
 
 0.723
CLOAM1048
Putative Protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.709
CLOAM0927
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.597
CLOAM1392
Hypothetical protein; No homology to any previously reported sequences.
  
  
 0.564
CLOAM0425
Putative Mitogen-activated protein kinase kinase kinase; No homology to any previously reported sequences.
   
 
 0.563
CLOAM0568
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.563
CLOAM1536
Putative DNA polymerase III, beta chain (dnaN-like); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is require [...]
   
 
 0.507
CLOAM1071
Putative Streptopain; No homology to any previously reported sequences.
   
 
 0.496
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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