STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0312XylR (modular protein). (714 aa)    
Predicted Functional Partners:
CLOAM1048
Putative Protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.523
CLOAM1343
Putative Adenylate cyclase.
 
     0.508
CLOAM1151
Putative Adenylate cyclase.
 
     0.501
CLOAM0568
Hypothetical protein; No homology to any previously reported sequences.
 
  
0.477
CLOAM0425
Putative Mitogen-activated protein kinase kinase kinase; No homology to any previously reported sequences.
 
  
0.470
CLOAM0193
Putative Phosphoprotein phosphatase; No homology to any previously reported sequences.
 
  
 0.465
CLOAM0313
Hypothetical protein; No homology to any previously reported sequences.
  
    0.464
CLOAM1071
Putative Streptopain; No homology to any previously reported sequences.
 
  
 0.407
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.