STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0314Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (263 aa)    
Predicted Functional Partners:
CLOAM0315
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CLOAM0317
Transcriptional Regulator, MerR family.
  
    0.751
glyQ
Glycine tRNA synthetase, alpha subunit.
       0.746
lnt
Putative Apolipoprotein N-acyltransferase precursor; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.746
CLOAM0319
Hypothetical protein; No homology to any previously reported sequences.
       0.746
hutI
Imidazolonepropionase (imidazolone-5-propionate hydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.641
CLOAM0321
Putative ssDNA exonuclease, 5'--> 3'-specific.
       0.490
hutU
Urocanate hydratase (Urocanase) (Imidazolonepropionate hydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.484
hutH
Histidine ammonia-lyase (Histidase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.449
CLOAM1306
Hypothetical protein; No homology to any previously reported sequences.
  
     0.426
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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