STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0314Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (263 aa)    
Predicted Functional Partners:
ftcd
Formimidoyltransferase-cyclodeaminase (Formiminotransferase-cyclodeaminase) (FTCD); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
CLOAM1684
Formate dehydrogenase major subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     
  0.900
rocA
Delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase); Function of strongly homologous gene; enzyme.
     
 0.812
CLOAM0022
Tartrate dehydratase alpha subunit (ttdA)/Fumarate hydratase class I,alpha chain (N-terminal); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.800
CLOAM0023
Tartrate dehydratase beta subunit (ttdB)/fumarate hydratase class I, beta chain (C-terminal); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.800
CLOAM0357
Putative NADH-dependent fumarate reductase (frd); Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
  0.800
purQ
Phosphoribosylformylglycinamidine synthase subunit PurQ; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought [...]
     
  0.800
aspC
Aminotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.800
glnA
Glutamine synthetase (glutamate--ammonia ligase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamine synthetase family.
     
  0.800
CLOAM0669
Putative Asparagine synthase (glutamine-hydrolyzing); No homology to any previously reported sequences.
     
  0.800
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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