STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0358Putative Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (150 aa)    
Predicted Functional Partners:
CLOAM0357
Putative NADH-dependent fumarate reductase (frd); Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
    0.779
rsfS
Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.726
argS
Arginyl-tRNA synthetase 1 (Arginine--tRNA ligase 1) (ArgRS 1).
     
 0.724
CLOAM0361
Hypothetical protein; No homology to any previously reported sequences.
       0.722
ctpA
Tail-specific protease (Carboxy-terminal processing protease) (C-terminal processing peptidase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S41A family.
  
    0.641
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.637
CLOAM0363
Bifunctional glmU protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.572
folK
Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.507
folB
Dihydroneopterin aldolase (DHNA); Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
  
    0.506
CLOAM0362
HIT family protein.
  
    0.500
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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