STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bukButyrate kinase; Belongs to the acetokinase family. (359 aa)    
Predicted Functional Partners:
pta-3
Phosphotransacetylase.
 
 0.992
atoD
Acetoacetate:butyrate CoA-transferase alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.916
pta-4
Phosphate acetyltransferase.
  
 0.911
atoA
Acetoacetate:butyrate CoA-transferase beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.905
pta-2
Phosphate acetyltransferase.
  
 0.904
CLOAM0398
Hypothetical protein; No homology to any previously reported sequences.
       0.773
pta
Phosphate acetyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.710
CLOAM0399
Hypothetical protein; No homology to any previously reported sequences.
       0.705
CLOAM0400
Putative rRNA methylase.
       0.705
gdhB
NAD-specific glutamate dehydrogenase (NAD-GDH) (NADH-dependent glutamate dehydrogenase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.680
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.