STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0412ABC transporter, ATP-binding protein, MsbA family (modular protein). (655 aa)    
Predicted Functional Partners:
potA
Spermidine/putrescine import ATP-binding protein potA (ABC transporter); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
   
0.902
ycjV
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Belongs to the ABC transporter superfamily.
 
 
  
0.898
lpxK
Putative tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
  
 0.787
CLOAM0415
Putative Glycosyl transferase, group 1.
  
 
 0.686
CLOAM0417
Putative glycosyl transferase.
  
 
 0.686
CLOAM0413
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.685
CLOAM0416
Glycosyl transferase, group 2 family protein.
  
  
 0.685
CLOAM0414
Putative Glycosyl transferase.
  
  
 0.681
CLOAM0418
Putative ADP-heptose:LPS heptosyltransferase II.
     
 0.677
CLOAM0420
Putative Molybdenum cofactor biosynthesis protein (ygdL-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.665
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.