STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0620Hypothetical protein; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (409 aa)    
Predicted Functional Partners:
CLOAM0084
ABC-type transport systems, involved in lipoprotein release, permease components.
 
 0.863
CLOAM1897
Putative ABC-type transport systems, involved in lipoprotein release, permease components.
 
 
 0.860
CLOAM1033
Hypothetical protein; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.859
CLOAM1734
Putative ABC-type transport systems, involved in lipoprotein release, permease components.
 
 
 0.859
CLOAM0087
Hypothetical protein; No homology to any previously reported sequences.
 
 0.852
CLOAM1032
Outer membrane efflux protein (fragment); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.843
CLOAM1034
Hypothetical protein; No homology to any previously reported sequences.
 0.837
CLOAM0085
ABC transporter, ATP-binding protein.
 
 
 0.808
nosY
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
  
 0.786
ccmA1
ABC-type multidrug transport system, ATPase component.
  
  
 0.781
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.