Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
nosYABC-type transport system involved in multi-copper enzyme maturation, permease component. (240 aa)    
Predicted Functional Partners:
CLOAM0623
Hypothetical protein; No homology to any previously reported sequences.
  
 0.988
ccmA1
ABC-type multidrug transport system, ATPase component.
 
 
 0.980
CLOAM0625
Putative Acetyltransferase.
 
     0.814
CLOAM0624
Hypothetical protein; No homology to any previously reported sequences.
       0.797
CLOAM0620
Hypothetical protein; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.786
ccmA
ABC-type multidrug transport system, ATPase component.
 
 
 0.729
CLOAM1521
ABC transporter, transmembrane region:ABC transporter related.
  
 
 0.659
pfk
6-phosphofructokinase (ATP-dependent phosphofructokinase) (ATP-PFK); Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
  
    0.621
CLOAM0618
PTS system IIA component fructose subfamily (modular protein).
  
    0.551
CLOAM0619
Hypothetical protein; No homology to any previously reported sequences.
       0.539
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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