Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CLOAM0702Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (131 aa)    
Predicted Functional Partners:
CLOAM0703
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    
0.559
CLOAM0599
Putative vitamin B12 transport system permease protein (ABC transporter) (btuC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.486
CLOAM0064
ABC transporter related (fragment).
  
 
 0.480
CLOAM0920
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.480
CLOAM0700
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
      
0.476
CLOAM0699
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    
0.424
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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