STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygeWPutative aspartate/ornithine carbamoyltransferase; Function of strongly homologous gene; putative enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (387 aa)    
Predicted Functional Partners:
CLOAM0717
Putative succinyl-diaminopimelate desuccinylase (SDAP) (dapE-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.858
CLOAM0715
Chlorohydrolase family protein.
 
    0.806
cpkA
Carbamate kinase (carbamate kinase-like) (carbamate kinase-like carbamoylphosphate synthetase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the carbamate kinase family.
  
 
 0.799
CLOAM0720
Putative Dihydroorotase; No homology to any previously reported sequences.
 
 
 0.727
CLOAM1147
Ornithine--oxo-acid transaminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.667
CLOAM0719
Putative threonine synthase.
 
   
 0.650
CLOAM0983
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
 
   
 0.600
pyrC
Dihydroorotase (DHOase); Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
 
 0.557
CLOAM0723
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.519
CLOAM0724
Hypothetical protein; No homology to any previously reported sequences.
       0.519
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.