Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
CLOAM0807Putative ABC transporter substrate-binding protein. (340 aa)    
Predicted Functional Partners:
CLOAM1543
Hydroxymethylpyrimidine transport system permease protein.
 
 
 0.920
CLOAM0806
Putative bifunctional signal transducer for sigma factor regulation / phosphoserine phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.894
tauB
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, ATPase components.
 
 
 0.837
CLOAM1590
Putative ABC transporter, substrate-binding protein.
 
    
0.548
CLOAM0964
Putative dye-linked L-proline dehydrogenase (pdhA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.424
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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