Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0865Capsule biosynthesis protein CapC. (151 aa)    
Predicted Functional Partners:
CLOAM0864
Capsule biosynthesis protein CapB.
 
   
 0.952
CLOAM0866
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.797
CLOAM0863
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CLOAM0867
Hypothetical protein; No homology to any previously reported sequences.
       0.746
CLOAM0868
Hypothetical protein; No homology to any previously reported sequences.
       0.736
CLOAM0871
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.651
CLOAM0869
Hypothetical protein; No homology to any previously reported sequences.
       0.546
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.546
murE
UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
  
  
 0.458
CLOAM0132
Hypothetical protein; No homology to any previously reported sequences.
  
     0.442
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.