STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0871Hypothetical protein; No homology to any previously reported sequences. (982 aa)    
Predicted Functional Partners:
CLOAM0865
Capsule biosynthesis protein CapC.
 
  
 0.658
CLOAM0887
Putative Gingipain R; No homology to any previously reported sequences.
  
     0.573
CLOAM0864
Capsule biosynthesis protein CapB.
 
     0.543
CLOAM1827
Putative Carboxypeptidase A; No homology to any previously reported sequences.
 
     0.504
CLOAM0081
Hypothetical protein; No homology to any previously reported sequences.
  
     0.464
CLOAM0800
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.437
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.