STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
tsaDPutative metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (338 aa)    
Predicted Functional Partners:
CLOAM1370
Putative Peptidase M22, glycoprotease.
  
 
 0.967
CLOAM0732
Hypothetical protein; No homology to any previously reported sequences.
  
 0.932
CLOAM1638
Predicted ATPase or kinase.
 
 
 0.869
CLOAM0875
Hypothetical protein; No homology to any previously reported sequences.
       0.797
CLOAM0876
Putative sigma-54 dependent DNA-binding response regulator.
       0.780
CLOAM0878
Putative 4-alpha-glucanotransferase.
  
    0.779
CLOAM0877
Putative alpha-amylase.
       0.773
CLOAM0879
Putative Glycogen debranching enzyme, archaeal type.
       0.773
CLOAM1017
Putative Protein-tyrosine-phosphatase; No homology to any previously reported sequences; Belongs to the SUA5 family.
  
 
 0.723
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
      0.664
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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