STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0888Hypothetical protein; No homology to any previously reported sequences. (215 aa)    
Predicted Functional Partners:
CLOAM1190
Anti-sigma regulatory factor (Ser/Thr protein kinase) (modular protein).
  
 
 0.926
CLOAM0806
Putative bifunctional signal transducer for sigma factor regulation / phosphoserine phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.764
CLOAM0889
Putative Sugar ABC transporter, periplasmic sugar-binding protein.
       0.714
CLOAM1094
ABC transporter, ATP-binding protein.
   
 
 0.659
CLOAM1236
ABC transporter, ATP-binding protein.
   
 
 0.659
hydG
Fe-hydrogenase assembly protein,S-adenosylmethionine radical protein; Function of strongly homologous gene; enzyme.
  
    0.605
CLOAM1048
Putative Protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.604
CLOAM1095
Transporter, putative (modular protein); Belongs to the MlaE permease family.
  
 
 0.586
CLOAM1724
Putative zinc-carboxypeptidase G precursor (metallocarboxypeptidase G) (CbpG); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.520
CLOAM1090
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.512
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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