STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
kce3-keto-5-aminohexanoate cleavage enzyme; Involved in the anaerobic fermentation of lysine. Catalyzes the reversible reaction between 3-keto-5-aminohexanoate (KAH) and acetyl-CoA to form 3-aminobutyryl-CoA and acetoacetate. The reaction involves the deprotonation of KAH, the nucleophilic addition onto acetyl-CoA and the intramolecular transfer of the CoA moiety. Belongs to the KCE family. (276 aa)    
Predicted Functional Partners:
kdd
3,5-diaminohexanoate dehydrogenase; Function experimentally demonstrated in the studied organism; enzyme.
 
  
 0.977
atoD
Acetoacetate:butyrate CoA-transferase alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.919
atoA
Acetoacetate:butyrate CoA-transferase beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.915
CLOAM0913
Putative B12-dependent ribonucleoside-diphosphate/-triphosphate reductase (nrdJ-like); Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
    0.780
kamD
L-beta-lysine 5,6-aminomutase alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.763
kamE
L-beta-lysine 5,6-aminomutase beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.756
CLOAM1350
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.639
CLOAM1598
Putative cyclase.
  
  
 0.601
CLOAM0915
Putative ApbE-like lipoprotein precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
    0.599
CLOAM0914
Hypothetical protein; No homology to any previously reported sequences.
       0.545
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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