STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0935Hypothetical protein; No homology to any previously reported sequences. (430 aa)    
Predicted Functional Partners:
CLOAM0934
Monofunctional biosynthetic peptidoglycan transglycosylase (Monofunctional TGase) (fragment); Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
       0.773
CLOAM0937
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.713
CLOAM0260
Hypothetical protein; No homology to any previously reported sequences.
  
     0.657
CLOAM1404
Hypothetical protein; No homology to any previously reported sequences.
  
     0.543
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.476
CLOAM1673
Putative Sensor protein.
  
     0.462
CLOAM1640
Response regulator.
  
     0.460
CLOAM1659
Hypothetical protein; No homology to any previously reported sequences.
  
     0.456
CLOAM0114
Hypothetical protein; No homology to any previously reported sequences.
  
     0.436
CLOAM0936
Putative DNA/RNA helicases, SNF2 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.423
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.