STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0944Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (155 aa)    
Predicted Functional Partners:
CLOAM1354
Putative cobalt transport system permease protein (ABC transporter) (cbiQ-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.851
CLOAM0945
Hypothetical protein; No homology to any previously reported sequences.
       0.664
CLOAM0946
Hypothetical protein; No homology to any previously reported sequences.
       0.592
CLOAM0947
Hypothetical protein; No homology to any previously reported sequences.
       0.592
CLOAM0265
Putative ribosomal protein in infB 5'region.
  
     0.563
rho
Transcription termination factor; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
 
     0.497
CLOAM0956
Hypothetical protein; No homology to any previously reported sequences.
 
     0.454
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.