Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0949Hypothetical protein; No homology to any previously reported sequences. (565 aa)    
Predicted Functional Partners:
CLOAM0951
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.840
CLOAM0132
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.829
mutS
DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
   
   0.783
rho
Transcription termination factor; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
  
    0.780
tadA
Cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.776
CLOAM1249
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.761
CLOAM0602
Hypothetical protein; No homology to any previously reported sequences.
  
     0.718
CLOAM1745
Hypothetical protein; No homology to any previously reported sequences.
 
   
 0.708
CLOAM0561
Hypothetical protein; No homology to any previously reported sequences.
  
     0.696
CLOAM1563
Hypothetical protein; No homology to any previously reported sequences.
  
     0.695
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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