Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CLOAM0956Hypothetical protein; No homology to any previously reported sequences. (670 aa)    
Predicted Functional Partners:
ccmA
ABC-type multidrug transport system, ATPase component.
 
 
 0.993
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.773
ccmA1
ABC-type multidrug transport system, ATPase component.
 
  
 0.568
CLOAM0246
Nitroreductase family protein.
  
  
 0.549
CLOAM0350
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.549
CLOAM0981
Putative NADH dehydrogenase/NAD(P)H nitroreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.549
CLOAM1414
Nitroreductase.
  
  
 0.549
CLOAM0954
Putative Patatin.
       0.478
CLOAM1521
ABC transporter, transmembrane region:ABC transporter related.
  
  
 0.462
CLOAM0944
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.453
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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