Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1032Outer membrane efflux protein (fragment); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1035 aa)    
Predicted Functional Partners:
CLOAM1033
Hypothetical protein; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.998
CLOAM0087
Hypothetical protein; No homology to any previously reported sequences.
  
 0.969
CLOAM1034
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.937
CLOAM1035
Putative Transcriptional regulator, TetR family.
 
   
 0.852
CLOAM0620
Hypothetical protein; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.843
CLOAM0086
Putative efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.797
yajC
Preprotein translocase subunit YajC.
  
 
 
 0.586
CLOAM1030
NifU-like domain protein.
  
    0.514
CLOAM1031
Hypothetical protein; No homology to any previously reported sequences.
       0.509
CLOAM1029
Putative Acid phosphatase; No homology to any previously reported sequences.
 
    0.460
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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