STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1034Hypothetical protein; No homology to any previously reported sequences. (459 aa)    
Predicted Functional Partners:
CLOAM1032
Outer membrane efflux protein (fragment); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.942
CLOAM1033
Hypothetical protein; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.938
CLOAM1035
Putative Transcriptional regulator, TetR family.
     
 0.799
CLOAM0620
Hypothetical protein; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.729
CLOAM0966
Putative Permease.
  
   
 0.701
CLOAM0967
Putative Permease YjgP/YjgQ.
  
   
 0.688
CLOAM0086
Putative efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.676
CLOAM0133
Hypothetical protein; No homology to any previously reported sequences.
 
   
 0.623
CLOAM0608
MotA/TolQ/ExbB proton channel family protein (modular protein).
  
   
 0.601
CLOAM0132
Hypothetical protein; No homology to any previously reported sequences.
 
 
 
 0.580
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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