STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CLOAM1040Putative DNA polymerase III, delta subunit (holA-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (349 aa)    
Predicted Functional Partners:
dnaE
DNA polymerase III, alpha subunit; Function of strongly homologous gene; enzyme.
  
 0.989
CLOAM1536
Putative DNA polymerase III, beta chain (dnaN-like); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is require [...]
   
 0.988
CLOAM0793
Putative DNA polymerase III, delta prime subunit (holB-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.973
dnaX
DNA polymerase III, gamma/tau subunits (fragment); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 0.973
uppP
Putative undecaprenyl pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.797
CLOAM1042
Hypothetical protein; No homology to any previously reported sequences.
       0.782
CLOAM1039
Putative 4-alpha-glucanotransferase.
       0.773
iorB
Indolepyruvate ferredoxin oxidoreductase, beta chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.693
iorA
Indolepyruvate ferredoxin oxidoreductase, alpha chain; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
       0.693
CLOAM1092
Hypothetical protein; No homology to any previously reported sequences.
 
     0.594
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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