STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1054V-type ATP synthase subunit D. (203 aa)    
Predicted Functional Partners:
CLOAM1050
Putative V-type ATPase, subunit E.
 
 0.999
CLOAM1051
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.999
CLOAM1052
V-type ATP synthase alpha chain 1 (V-type ATPase subunit A 1).
 
 0.999
CLOAM1053
V-type ATP synthase beta chain 1 (V-type ATPase subunit B 1).
 
 0.999
CLOAM1055
Putative V(Vacuolar)-type Na+ ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
CLOAM1056
Putative V(Vacuolar)-type Na+-ATP synthase subunit K.
 
 0.999
hymB
[Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit beta; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.532
CLOAM1057
Hypothetical protein; No homology to any previously reported sequences.
  
     0.470
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
  
    0.465
CLOAM1049
Putative Lipid A biosynthesis acyltransferase.
       0.420
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.