Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CLOAM1063Hypothetical protein; No homology to any previously reported sequences. (1099 aa)    
Predicted Functional Partners:
CLOAM1064
SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit.
 
   
 0.949
CLOAM0488
Restriction modification system DNA specificity domain:N-6 DNA methylase:Type I restriction-modification system, M subunit.
 
 
 0.795
CLOAM0219
Putative Type I restriction-modification system specificity subunit.
  
 
 0.746
CLOAM0936
Putative DNA/RNA helicases, SNF2 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.686
CLOAM0489
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.601
CLOAM1062
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.593
CLOAM0220
DEAD/DEAH box helicase.
  
  
 0.565
CLOAM0937
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
0.559
CLOAM1061
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.536
CLOAM1102
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.520
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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