STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmbHD,D-heptose 1,7-bisphosphate phosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the gmhB family. (196 aa)    
Predicted Functional Partners:
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
  
 0.995
CLOAM0367
Glycerol-3-phosphate cytidyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
  
 0.990
CLOAM0368
Carbohydrate kinase, PfkB.
 
  
 0.951
CLOAM0418
Putative ADP-heptose:LPS heptosyltransferase II.
   
 0.935
CLOAM0656
Putative Mannose-1-phosphate guanylyltransferase; Homologs of previously reported genes of unknown function.
 
 
 0.923
xthA
Exonuclease III.
   
 
 0.834
CLOAM1176
Putative increased membrane permeability protein or organic solvent tolerance protein (imp-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
     
 0.798
CLOAM1178
Putative tRNA/rRNA methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.786
CLOAM1179
Xanthine dehydrogenase accessory factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 14622263, 15294283.
       0.773
CLOAM1439
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.704
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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