STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hymC[Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (594 aa)    
Predicted Functional Partners:
CLOAM1182
NADH-quinone oxidoreductase subunit E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 0.998
CLOAM1685
NADH-quinone oxidoreductase subunit F; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.996
CLOAM1686
NADH-quinone oxidoreductase subunit E; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.994
hymB
[Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit beta; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.992
CLOAM1181
NADP-reducing hydrogenase subunit HndC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.989
hymA
[Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit gamma; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.985
CLOAM1184
Putative ferredoxin, 2Fe-2S (thioredoxin-like [2Fe-2S] ferredoxin) (hymB-like partial match); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
 
 0.972
CLOAM0324
Pyruvate-ferredoxin/flavodoxin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.948
rnfB
Electron transport complex protein rnfB,polyferredoxin subunit (rnfB module); Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.946
CLOAM0964
Putative dye-linked L-proline dehydrogenase (pdhA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.921
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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