Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CLOAM1233CBS domain protein (modular protein). (421 aa)    
Predicted Functional Partners:
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.849
CLOAM1231
Hypothetical protein; No homology to any previously reported sequences.
       0.787
CLOAM1235
Hypothetical protein; No homology to any previously reported sequences.
  
    0.670
CLOAM1234
Hypothetical protein; No homology to any previously reported sequences.
       0.655
CLOAM1236
ABC transporter, ATP-binding protein.
       0.655
CLOAM1237
Hypothetical protein; No homology to any previously reported sequences.
       0.655
mrcA
Penicillin-binding bifunctional protein 1A (PBP-1a) (PBP1a); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.655
CLOAM1242
Putative radical SAM-dependent enzyme (yfgB); Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.
       0.631
CLOAM1240
Putative Transferase hexapeptide repeat.
       0.626
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.626
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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