STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrcAPenicillin-binding bifunctional protein 1A (PBP-1a) (PBP1a); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (682 aa)    
Predicted Functional Partners:
mrdA
Penicillin-binding protein 2 (PBP-2); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.972
CLOAM0934
Monofunctional biosynthetic peptidoglycan transglycosylase (Monofunctional TGase) (fragment); Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
  
  
 
0.919
CLOAM1234
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CLOAM1235
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CLOAM1236
ABC transporter, ATP-binding protein.
       0.773
CLOAM1237
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CLOAM0740
Tetratricopeptide repeat transcriptional regulator (modular protein).
 
  
 0.768
CLOAM1241
Tpl protein.
       0.735
CLOAM1242
Putative radical SAM-dependent enzyme (yfgB); Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.
       0.735
CLOAM1240
Putative Transferase hexapeptide repeat.
     
 0.732
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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