STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (247 aa)    
Predicted Functional Partners:
CLOAM1268
Hypothetical protein; No homology to any previously reported sequences.
 0.989
CLOAM1734
Putative ABC-type transport systems, involved in lipoprotein release, permease components.
 
 0.963
CLOAM1897
Putative ABC-type transport systems, involved in lipoprotein release, permease components.
 
 0.962
CLOAM0084
ABC-type transport systems, involved in lipoprotein release, permease components.
 
 
 0.957
CLOAM0143
Hypothetical protein; No homology to any previously reported sequences.
 
 0.956
ccmA1
ABC-type multidrug transport system, ATPase component.
  
0.919
ccmA
ABC-type multidrug transport system, ATPase component.
  
0.832
CLOAM1270
Hypothetical protein; No homology to any previously reported sequences.
  
    0.736
CLOAM1267
Glycosyltransferase.
   
   0.656
tatD
Mg-dependent DNase.
 
 
   0.627
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.