STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1319Hypothetical protein; No homology to any previously reported sequences. (628 aa)    
Predicted Functional Partners:
CLOAM0065
Hypothetical protein; No homology to any previously reported sequences.
  
     0.770
CLOAM1317
Conserved hypothetical protein; Doubtful CDS.
       0.705
CLOAM1318
Hypothetical protein; No homology to any previously reported sequences.
       0.705
CLOAM1034
Hypothetical protein; No homology to any previously reported sequences.
  
   
 0.572
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
 
 0.515
CLOAM0605
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.514
CLOAM1493
Hypothetical protein; No homology to any previously reported sequences.
  
   
 0.507
CLOAM0991
MotA/TolQ/ExbB proton channel family protein (fragment).
 
   
 0.506
CLOAM0599
Putative vitamin B12 transport system permease protein (ABC transporter) (btuC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
 0.478
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.