STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1350Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (331 aa)    
Predicted Functional Partners:
kdd
3,5-diaminohexanoate dehydrogenase; Function experimentally demonstrated in the studied organism; enzyme.
 
     0.941
kamA
L-lysine 2,3-aminomutase (KAM) (LAM); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.830
kamE
L-beta-lysine 5,6-aminomutase beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.798
kamD
L-beta-lysine 5,6-aminomutase alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.798
CLOAM1353
Hypothetical protein; No homology to any previously reported sequences.
       0.778
yiiP
Putative cation efflux family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.773
kce
3-keto-5-aminohexanoate cleavage enzyme; Involved in the anaerobic fermentation of lysine. Catalyzes the reversible reaction between 3-keto-5-aminohexanoate (KAH) and acetyl-CoA to form 3-aminobutyryl-CoA and acetoacetate. The reaction involves the deprotonation of KAH, the nucleophilic addition onto acetyl-CoA and the intramolecular transfer of the CoA moiety. Belongs to the KCE family.
 
     0.638
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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