STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbrRubrerythrin (RR) (rubredoxin-dependent,iron-containing peroxidase); Function of strongly homologous gene; enzyme. (196 aa)    
Predicted Functional Partners:
hymC
[Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.902
rub
Rubredoxin-type Fe(Cys)4 protein; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the rubredoxin family.
  
  
 0.836
dfx
Rubredoxin-dependent superoxide reductase (SOR) (desulfoferrodoxin); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.827
CLOAM1369
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.666
fprA
Nitric oxide reductase (Type A flavoprotein) (FMN-protein) (Flavoprotein A); Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
 
  
 0.565
CLOAM1370
Putative Peptidase M22, glycoprotease.
       0.528
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.513
CLOAM1365
Hypothetical protein; No homology to any previously reported sequences.
       0.478
CLOAM1906
Hypothetical protein; No homology to any previously reported sequences; Belongs to the Fur family.
  
  
 0.472
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.