STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1409Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (294 aa)    
Predicted Functional Partners:
CLOAM1408
Hypothetical protein; No homology to any previously reported sequences.
 
    0.931
CLOAM1410
MoxR family protein.
  
 0.921
CLOAM1406
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.888
CLOAM1407
BatA protein (fragment).
 
  
 0.888
CLOAM1404
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.887
CLOAM1405
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.601
CLOAM1403
Hypothetical protein; No homology to any previously reported sequences.
 
    0.581
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
       0.483
CLOAM1325
MoxR family protein.
  
 0.441
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.