STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1418Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (223 aa)    
Predicted Functional Partners:
CLOAM0247
Hypothetical protein; No homology to any previously reported sequences.
 
     0.799
CLOAM0134
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.794
CLOAM1586
Hypothetical protein; No homology to any previously reported sequences.
 
     0.789
CLOAM0158
Hypothetical protein; No homology to any previously reported sequences.
 
     0.781
CLOAM1417
Putative UDP-2,3-diacylglucosamine hydrolase (lpxH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.778
CLOAM1419
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CLOAM0021
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.767
CLOAM1420
Hypothetical protein; No homology to any previously reported sequences.
     
 0.742
CLOAM1421
Hypothetical protein; No homology to any previously reported sequences.
       0.552
nusB
N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.539
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.