STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1486Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative enzyme. (70 aa)    
Predicted Functional Partners:
CLOAM1487
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative enzyme.
  
 
 0.977
CLOAM1490
Glutamine---fructose-6-phosphate transaminase (isomerizing); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.804
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECPS) (MECDP-synthase); Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.778
CLOAM1488
Putative Molybdopterin-guanine dinucleotide biosynthesis protein B.
       0.774
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.768
CLOAM1492
Putative enzyme with radical SAM domain protein (Fe-S oxidoreductases); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.762
CLOAM1493
Hypothetical protein; No homology to any previously reported sequences.
       0.762
tilS
Putative tRNA(Ile)-lysidine synthase (tilS-like); Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
  
 
 0.737
hydG
Fe-hydrogenase assembly protein,S-adenosylmethionine radical protein; Function of strongly homologous gene; enzyme.
  
  
 0.721
CLOAM0963
Putative dye-linked L-proline dehydrogenase (pdhB); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.441
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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