STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CLOAM1498Putative glutamyl aminopeptidase (EAP) (aminopeptidase A) (APA) (Enpep); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (974 aa)    
Predicted Functional Partners:
adhB
Iron-containing alcohol dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
   0.784
pepP
Xaa-Pro aminopeptidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.663
CLOAM0610
Hypothetical protein; No homology to any previously reported sequences.
  
     0.564
fusA
Translation elongation factor EF-G.
   
 
 0.476
fusA-
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
   
 
 0.476
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.467
CLOAM0887
Putative Gingipain R; No homology to any previously reported sequences.
  
     0.463
CLOAM0825
Putative tricorn protease (tri); Degrades oligopeptides; Belongs to the peptidase S41B family.
 
  
 0.445
CLOAM0429
Hypothetical protein; No homology to any previously reported sequences.
  
     0.444
CLOAM0603
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.435
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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