STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yahGConserved hypothetical protein; Homologs of previously reported genes of unknown function. (465 aa)    
Predicted Functional Partners:
CLOAM1600
FdrA.
     0.994
CLOAM1598
Putative cyclase.
 
     0.860
CLOAM1601
Hypothetical protein; No homology to any previously reported sequences.
       0.768
hymB
[Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit beta; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.674
CLOAM0324
Pyruvate-ferredoxin/flavodoxin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.668
CLOAM1684
Formate dehydrogenase major subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.614
CLOAM1597
Putative dehydrogenase, FAD binding subunit,medium chain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.609
CLOAM1595
Putative dehydrogenase, molybdenum binding subunit, large chain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.605
CLOAM1482
Putative electron transfer flavoprotein alpha-subunit (etfA and 4Fe-4S ferredoxin modules); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
  
 0.600
etfB
Electron transfer flavoprotein beta subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier.
  
  
 0.511
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.