STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Experiments
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[Homology]
Score
CLOAM1631Dihydropyrimidine dehydrogenase (NADP+); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (821 aa)    
Predicted Functional Partners:
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.983
pyrR
Bifunctional protein : Pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
  
 
 0.964
hymB
[Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit beta; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.941
deoA
Thymidine phosphorylase.
    
 0.919
CLOAM1181
NADP-reducing hydrogenase subunit HndC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.916
CLOAM1685
NADH-quinone oxidoreductase subunit F; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.908
indA
Uncharacterized enzyme involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
   
 
 0.907
CLOAM1182
NADH-quinone oxidoreductase subunit E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.907
hymA
[Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit gamma; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.907
CLOAM1686
NADH-quinone oxidoreductase subunit E; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.907
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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