STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1680Glycosyl transferase, group 2 family protein. (238 aa)    
Predicted Functional Partners:
wbbJ
Acetyltransferase (the isoleucine patch superfamily).
  
  
 0.843
ruvB
Holliday junction helicase, subunit B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
      0.796
CLOAM1678
Hypothetical protein; No homology to any previously reported sequences.
  
  
 0.750
CLOAM0260
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.631
xerC-2
Site-specific recombinase, phage integrase family; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.554
CLOAM1249
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.512
CLOAM0434
Putative Non-specific protein-tyrosine kinase; No homology to any previously reported sequences.
  
  
 0.503
CLOAM1417
Putative UDP-2,3-diacylglucosamine hydrolase (lpxH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.412
CLOAM1176
Putative increased membrane permeability protein or organic solvent tolerance protein (imp-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
  
 0.402
CLOAM0648
Putative Glycosyl transferase, family 2.
 
  
 0.401
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.