STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1710Hypothetical protein; No homology to any previously reported sequences. (190 aa)    
Predicted Functional Partners:
CLOAM1369
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.645
CLOAM0298
2-oxoglutarate ferredoxin oxidoreductase subunit delta; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
    0.528
CLOAM1709
Putative Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
       0.486
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.465
dfx
Rubredoxin-dependent superoxide reductase (SOR) (desulfoferrodoxin); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.428
fprA
Nitric oxide reductase (Type A flavoprotein) (FMN-protein) (Flavoprotein A); Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
 
     0.419
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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