STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1763Hypothetical protein; No homology to any previously reported sequences. (167 aa)    
Predicted Functional Partners:
lptB
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily.
  
 0.996
CLOAM1762
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.979
kdsC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.
  
  
 0.900
CLOAM0966
Putative Permease.
  
 
 0.798
CLOAM0967
Putative Permease YjgP/YjgQ.
  
 
 0.798
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family.
  
  
 0.759
metK
S-adenosylmethionine synthetase (Methionine adenosyltransferase) (AdoMet synthetase) (MAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the AdoMet synthase family.
       0.722
CLOAM0743
Carbohydrate isomerase, KpsF/GutQ family; Belongs to the SIS family. GutQ/KpsF subfamily.
  
  
 0.464
lpxC/fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
  
 0.460
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.