Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CLOAM1805Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (230 aa)    
Predicted Functional Partners:
asnB
Asparagine synthetase (Glutamine-hydrolyzing); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
    0.902
CLOAM1806
Hypothetical protein; No homology to any previously reported sequences.
       0.778
rodA
Rod shape-determining protein RodA; Belongs to the SEDS family.
       0.773
mrdA
Penicillin-binding protein 2 (PBP-2); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.773
CLOAM1804
Hypothetical protein; No homology to any previously reported sequences.
       0.773
mreB
Cell wall structural complex MreBCD, actin-like component MreB.
       0.586
dtd
D-tyrosyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.533
CLOAM1801
Hypothetical protein; No homology to any previously reported sequences.
       0.533
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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