Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mreBCell wall structural complex MreBCD, actin-like component MreB. (345 aa)    
Predicted Functional Partners:
CLOAM1806
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.978
mrdA
Penicillin-binding protein 2 (PBP-2); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.940
rodA
Rod shape-determining protein RodA; Belongs to the SEDS family.
 
 
 0.909
CLOAM0283
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.852
tufB
Protein chain elongation factor EF-Tu (duplicate of tufA); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.686
ftsZ
Cell division protein FtsZ, tubulin-like GTP-binding protein and GTPase; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.670
CLOAM1084
Hypothetical protein; No homology to any previously reported sequences.
  
   0.596
CLOAM1805
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.586
CLOAM1804
Hypothetical protein; No homology to any previously reported sequences.
       0.580
CLOAM0787
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 
 0.566
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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